EMBOSS explorer

scopalign

Generate alignments for families in a scop classification file by using STAMP (read the manual)

Unshaded fields are optional and can safely be ignored. (hide optional fields)

Input section
Name of scop classification file (embl format input):
Output section
Location of scop family alignment files (output)
Extension of scop family alignment files (output)
Location of structure alignment files (output)
Extension of structure alignment files (output)
Run section
Email address: If you are submitting a long job and would like to be informed by email when it finishes, enter your email address here.